Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
RS1Retinoschisin 1. (261 aa)    
Predicted Functional Partners:
dthd1
Death domain containing 1.
      
 0.719
rp2
Protein XRP2; Acts as a GTPase-activating protein (GAP) for tubulin in concert with tubulin-specific chaperone C, but does not enhance tubulin heterodimerization.
   
  
 0.587
sp2
Sp2 transcription factor.
    
 
 0.570
pros1
Protein S.
   
 0.560
sarm1
Sterile alpha and TIR motif containing 1.
    
 
 0.547
LOC107104976
Peripherin 2-like b.
   
 
 0.532
LOC107101393
Peripherin 2b (retinal degeneration, slow).
   
 
 0.532
ENSCVAP00000015190
Peripherin 2-like a; Belongs to the tetraspanin (TM4SF) family.
   
 
 0.532
LOC107090924
Peripherin 2a (retinal degeneration, slow).
   
 
 0.532
Slc40a1
Solute carrier family 40 protein; May be involved in iron transport and iron homeostasis. Belongs to the ferroportin (FP) (TC 2.A.100) family. SLC40A subfamily.
    
 0.518
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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