Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107090648Suppression of tumorigenicity 14a. (743 aa)    
Predicted Functional Partners:
spint1
Serine peptidase inhibitor, Kunitz type 1 a.
   
 0.703
ENSCVAP00000030408
Uncharacterized protein.
   
 0.536
LOC107103484
Uncharacterized protein.
    
 0.495
ENSCVAP00000011189
Coagulation factor II (thrombin) receptor-like 1, tandem duplicate 2.
    
 0.491
elf3
E74-like factor 3 (ets domain transcription factor, epithelial-specific ).
      
 0.470
ENSCVAP00000015893
NDK domain-containing protein.
    
 0.460
wdr90
WD repeat domain 90.
    
 0.433
ptgs2
Prostaglandin-endoperoxide synthase 2b.
    
 
 0.413
agt
Angiotensinogen; Belongs to the serpin family.
   
 0.408
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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