STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107090648Suppression of tumorigenicity 14a. (743 aa)    
Predicted Functional Partners:
spint1
Serine peptidase inhibitor, Kunitz type 1 a.
   
 0.578
mst1r
Macrophage stimulating 1 receptor b.
    
 0.566
met
MET proto-oncogene, receptor tyrosine kinase.
    
 0.566
LOC107097508
Macrophage stimulating 1 receptor a.
    
 0.566
LOC107103484
Uncharacterized protein.
   
 0.535
ENSCVAP00000030408
Uncharacterized protein.
   
 0.463
wdr90
WD repeat domain 90.
    
 0.453
LOC107096265
Zgc:112160; Belongs to the peptidase S1 family.
  
0.423
LOC107096266
Zgc:136461; Belongs to the peptidase S1 family.
  
0.416
LOC107100709
Zgc:171592; Belongs to the peptidase S1 family.
  
0.416
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.