STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000001458Uncharacterized protein. (128 aa)    
Predicted Functional Partners:
ENSCVAP00000032118
Guanylate kinase-like domain-containing protein.
    
 0.500
rsph14
Uncharacterized protein.
   
 
 0.497
cfap161
Cilia and flagella associated protein 161.
   
 0.448
Ccdc146
Uncharacterized protein.
    
 0.447
dnaaf1
Dynein assembly factor 1, axonemal.
    
 0.434
Lrrc6
Leucine rich repeat containing 6.
    
 0.430
ENSCVAP00000006956
Uncharacterized protein.
   
 
 0.426
ENSCVAP00000026293
Uncharacterized protein.
     
 0.422
Lrrc34
Uncharacterized protein.
    
 0.417
mysm1
Myb-like, SWIRM and MPN domains 1.
    
 0.405
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.