Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000001458Uncharacterized protein. (128 aa)    
Predicted Functional Partners:
lrrc23
Leucine rich repeat containing 23.
   
 0.937
ENSCVAP00000024813
Uncharacterized protein.
   
 
 0.921
zmynd12
Zinc finger, MYND-type containing 12.
   
 
 0.828
cfap20
Cilia and flagella associated protein 20.
    
 
 0.759
ENSCVAP00000021266
Uncharacterized protein.
   
 0.756
efcab1
EF-hand calcium binding domain 1.
   
 
 0.740
ebna1bp2
EBNA1 binding protein 2.
    
 
 0.734
ENSCVAP00000002985
Uncharacterized protein.
    
 
 0.718
ENSCVAP00000005095
Uncharacterized protein.
   
 0.689
LOC107094546
Adenylate kinase 7a.
   
   0.687
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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