Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000001522SEC7 domain-containing protein. (153 aa)    
Predicted Functional Partners:
ENSCVAP00000001515
PH domain-containing protein.
 
      0.899
LOC107090869
ADP-ribosylation factor 6b; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.543
ENSCVAP00000018217
Uncharacterized protein.
    
 
 0.543
rd3
Retinal degeneration 3, GUCY2D regulator.
      
 0.517
prc1
Protein regulator of cytokinesis 1b.
      
 0.456
ENSCVAP00000022172
Uncharacterized protein.
      
 0.456
pigg
Phosphatidylinositol glycan anchor biosynthesis class G.
      
 0.422
arl15
ADP-ribosylation factor-like 15a.
    
 
 0.411
tmem161b
Transmembrane protein 161B.
      
 0.407
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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