Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000001525Immediate early response 3 interacting protein 1. (92 aa)    
Predicted Functional Partners:
tmem167a
Protein kish; Involved in the early part of the secretory pathway. Belongs to the KISH family.
   
 
 0.696
wdr26
WD repeat domain 26b.
      
 0.680
LOC107104285
Protein YIPF.
   
 
 0.606
yipf5
Protein YIPF.
   
 
 0.606
LOC107098143
RNA binding motif protein 4.1.
      
 0.603
tmco1
Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling.
   
  
 0.592
Srrm1
PWI domain-containing protein.
      
 0.589
mtmr10
Myotubularin related protein 10.
      
 0.556
selenos
Selenoprotein S.
   
 
 0.556
yipf6
Protein YIPF.
      
 0.549
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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