STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nudt5Nudix (nucleoside diphosphate linked moiety X)-type motif 5; Belongs to the Nudix hydrolase family. (215 aa)    
Predicted Functional Partners:
pgm1
Phosphoglucomutase 1; Belongs to the phosphohexose mutase family.
   
 
 0.909
Prps2
Pribosyltran_N domain-containing protein.
  
 
 0.909
LOC107083608
Uncharacterized protein.
   
 
 0.909
LOC107089056
Phosphoribosyl pyrophosphate synthetase 1B.
  
 
 0.909
LOC107081479
Uncharacterized protein.
  
 
 0.909
pgm2
Phosphoglucomutase 2.
  
 
  0.904
adprm
ADP-ribose/CDP-alcohol diphosphatase, manganese-dependent.
    
 0.903
dcp1b
Decapping mRNA 1B.
    
 0.743
dcp1a
Decapping mRNA 1A.
    
 0.743
naxe
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX.
  
 0.730
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.