Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
phtf2Putative homeodomain transcription factor 2. (766 aa)    
Predicted Functional Partners:
MSL3
MSL complex subunit 3.
    
 0.805
LOC107103204
RING-type domain-containing protein.
    
 0.695
msl2
MSL complex subunit 2.
    
 0.695
polr3d
Polymerase (RNA) III (DNA directed) polypeptide D.
    
 0.579
maml1
Mastermind-like transcriptional coactivator 1.
   
 0.547
snw1
SNW domain containing 1.
   
  0.520
ENSCVAP00000011901
Uncharacterized protein.
    
 0.490
kat7
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.490
kat6b
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.490
kat6a
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.490
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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