Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107095771TRAF3 interacting protein 2-like. (439 aa)    
Predicted Functional Partners:
LOC107095042
SEFIR domain-containing protein.
    
 0.954
traf6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.924
traf3ip2
SEFIR domain-containing protein.
     
 
0.900
traf3
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.838
LOC107098152
Serine/threonine-protein kinase; Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family.
    
 
 0.696
irak4
Interleukin-1 receptor-associated kinase 4.
    
 0.692
LOC107102542
Zgc:86598; Belongs to the protein kinase superfamily.
    
 0.690
LOC107098934
Serine/threonine-protein kinase; Belongs to the protein kinase superfamily. CAMK Ser/Thr protein kinase family.
    
 
 0.681
LOC107092860
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.611
LOC107103870
TNF receptor-associated factor.
    
 0.611
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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