Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
gcnt7Glucosaminyl (N-acetyl) transferase family member 7. (417 aa)    
Predicted Functional Partners:
fam199x
Family with sequence similarity 199, X-linked.
      
 0.726
eogt
EGF domain-specific O-linked N-acetylglucosamine (GlcNAc) transferase.
      
 0.612
b4gat1
Beta-1,4-glucuronyltransferase 1.
      
 0.579
man2c1
Mannosidase, alpha, class 2C, member 1.
      
 0.572
LOC107094135
Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase.
     
 0.554
st3gal3
ST3 beta-galactoside alpha-2,3-sialyltransferase 3b; Belongs to the glycosyltransferase 29 family.
      
 0.544
mest
Mesoderm specific transcript.
      
 0.537
LOC107093917
DEAQ box RNA-dependent ATPase 1.
      
 0.530
dhx32
DEAH (Asp-Glu-Ala-His) box polypeptide 32a.
      
 0.530
LOC107093566
DEAH (Asp-Glu-Ala-His) box polypeptide 32b.
      
 0.530
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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