STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107094600Ras association domain family member 8b. (433 aa)    
Predicted Functional Partners:
LOC107095536
Uncharacterized protein.
    
 
 0.456
tp53bp2
Tumor protein p53 binding protein, 2a.
    
 
 0.454
ENSCVAP00000017898
Uncharacterized protein.
    
 
 0.454
ppp1r13b
Protein phosphatase 1, regulatory subunit 13Bb.
    
 
 0.454
ppp1r13l
Protein phosphatase 1, regulatory subunit 13 like.
    
 
 0.454
LOC107101549
Protein phosphatase 1, regulatory subunit 13Ba.
    
 
 0.454
ENSCVAP00000017893
Uncharacterized protein.
    
 
 0.445
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.