Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ntng1Netrin g1a. (462 aa)    
Predicted Functional Partners:
LOC107095815
Info leucine-rich repeat, immunoglobulin-like and transmembrane domains 3a.
    
 0.705
lrit1
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1b.
    
 0.699
LOC107092323
Leucine-rich repeat, immunoglobulin-like and transmembrane domains 1a.
    
 0.699
lrrc4c
Leucine rich repeat containing 4C, genome duplicate a.
   
 0.657
neo1
Neogenin 1b.
    
 0.654
ENSCVAP00000029632
DCC netrin 1 receptor.
    
 0.622
LOC107094048
Leucine rich repeat containing 4C, genome duplicate b.
   
 0.610
unc5a
Unc-5 netrin receptor A.
    
 0.578
Igdcc4
Uncharacterized protein.
    
 0.574
igdcc3
Immunoglobulin superfamily, DCC subclass, member 3.
    
 0.574
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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