STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107097293Golgin A7. (158 aa)    
Predicted Functional Partners:
LOC107103312
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
   
 0.874
zdhhc5
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
   
 0.874
zdhhc8
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
   
 0.873
zdhhc9
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
   
 0.807
LOC107093931
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
   
 0.720
LOC107101260
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
   
 0.651
ZDHHC14
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
   
 0.651
zdhhc18
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
   
 0.651
ENSCVAP00000032099
Uncharacterized protein.
   
 0.651
LOC107091138
Uncharacterized protein.
   
   0.595
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
Server load: low (20%) [HD]