STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spag9Sperm associated antigen 9a. (1206 aa)    
Predicted Functional Partners:
LOC107090869
ADP-ribosylation factor 6b; Belongs to the small GTPase superfamily. Arf family.
    
 0.624
ENSCVAP00000018217
Uncharacterized protein.
    
 0.624
arl15
ADP-ribosylation factor-like 15a.
    
 0.470
map2k7
Mitogen-activated protein kinase kinase 7.
    
 
 0.468
abl1
Tyrosine-protein kinase.
    
  0.461
abl2
Tyrosine-protein kinase.
    
  0.461
cdon
Cell adhesion associated, oncogene regulated.
     
 0.431
boc
BOC cell adhesion associated, oncogene regulated.
     
 0.431
CDC42
Cell division cycle 42.
    
  0.430
LOC107085118
Uncharacterized protein.
    
  0.430
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.