Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000001666Uncharacterized protein. (191 aa)    
Predicted Functional Partners:
vps35
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
    
 
 0.591
gak
Cyclin G associated kinase.
     
 0.573
LOC107087023
Nerve growth factor a (beta polypeptide); Belongs to the NGF-beta family.
    
 
 0.537
LOC107094590
Sortilin-related VPS10 domain containing receptor 2.
 
      0.519
LOC107083332
Sortilin.
    
 
 0.443
sort1
Sortilin.
    
 
 0.443
LOC107101171
Sortilin.
    
 
 0.443
LOC107092801
Nerve growth factor receptor a (TNFR superfamily, member 16).
    
 
 0.415
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.