STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
angptl5Angiopoietin-like 5. (385 aa)    
Predicted Functional Partners:
LOC107097932
Neurocan b.
    
 0.642
trpc1
Transient receptor potential cation channel, subfamily C, member 1; Belongs to the transient receptor (TC 1.A.4) family.
   
  
 0.610
draxin
Draxin; Chemorepulsive axon guidance protein required for the development of spinal cord and forebrain commissures. Acts as a chemorepulsive guidance protein for commissural axons during development. Able to inhibit or repel neurite outgrowth from dorsal spinal cord; Belongs to the draxin family.
      
 0.610
kcng2
Potassium voltage-gated channel, subfamily G, member 2; Belongs to the potassium channel family.
      
 0.610
EFCC1
EF-hand and coiled-coil domain containing 1.
      
 0.610
LYPD6
LY6/PLAUR domain containing 6.
      
 0.610
pdyn
Prodynorphin.
      
 0.605
anxa6
Annexin.
      
 0.604
fgg
Fibrinogen gamma chain.
   
 
 
0.569
LOC107082275
Fib_alpha domain-containing protein.
   
 
  0.562
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
Server load: medium (64%) [HD]