Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
fxr1Fragile X mental retardation, autosomal homolog 1. (705 aa)    
Predicted Functional Partners:
cyfip2
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
    
 
 0.897
fmr1
Fragile X mental retardation 1.
   
 
 0.832
cyfip1
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
    
 
 0.798
LOC107085587
Cell cycle associated protein 1a.
   
 
 0.761
caprin1
Cell cycle associated protein 1b.
   
 
 0.761
nufip2
Nuclear FMR1 interacting protein 2.
   
 
 0.740
ENSCVAP00000006422
Tudor domain containing 3.
    
 
 0.731
LOC107082497
Tudor domain containing 3.
    
 
 0.731
SERBP1
HABP4_PAI-RBP1 domain-containing protein.
   
 
 0.710
serbp1
SERPINE1 mRNA binding protein 1a.
   
 
 0.710
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
Server load: low (14%) [HD]