STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000001723Uncharacterized protein. (807 aa)    
Predicted Functional Partners:
ENSCVAP00000020988
PDZ and pleckstrin homology domains 1.
 
      0.858
ift57
Intraflagellar transport 57 homolog (Chlamydomonas).
    
 0.552
ift172
Intraflagellar transport 172.
    
 0.550
traf3ip1
TNF receptor-associated factor 3 interacting protein 1.
    
 0.538
ift52
Intraflagellar transport 52 homolog (Chlamydomonas).
    
 0.496
cluap1
Clusterin associated protein 1.
    
 0.492
LOC107088929
Fleer.
    
 0.483
ENSCVAP00000001965
Protein kinase domain-containing protein.
   
 0.474
cask
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
   
 0.474
ENSCVAP00000021138
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
   
 0.474
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.