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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pomkProtein O-mannose kinase. (343 aa)    
Predicted Functional Partners:
fktn
Fukutin.
  
  
 0.970
b3galnt2
Hexosyltransferase.
     
 0.965
LOC107090395
Peptidase S72 domain-containing protein.
     
 0.707
LOC107102255
Dystroglycan 1.
     
 0.707
b4gat1
Beta-1,4-glucuronyltransferase 1.
    
 
 0.666
pomgnt2
Protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-).
      
 0.665
pomt1
Protein-O-mannosyltransferase 1.
    
 
 0.664
pomgnt1
Protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-).
    
 
 0.663
pomt2
Protein-O-mannosyltransferase 2.
    
 
 0.662
rxylt1
Ribitol xylosyltransferase 1.
      
 0.661
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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