STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ptprkProtein tyrosine phosphatase receptor type K. (1473 aa)    
Predicted Functional Partners:
ror1
Receptor tyrosine kinase-like orphan receptor 1; Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.571
ENSCVAP00000006968
Uncharacterized protein.
    
 0.526
PTK7
Protein tyrosine kinase 7 (inactive); Belongs to the protein kinase superfamily. Tyr protein kinase family.
    
 0.526
Ptk7
Ig-like domain-containing protein.
    
 0.526
grb2
Growth factor receptor-bound protein 2b.
   
 0.523
fras1
Fraser extracellular matrix complex subunit 1.
   
 
 0.457
LOC107101915
Transforming growth factor, alpha.
     
 0.429
rps27a
Ribosomal protein S27a.
    
  0.425
mst1r
Macrophage stimulating 1 receptor b.
   
 0.419
met
MET proto-oncogene, receptor tyrosine kinase.
   
 0.419
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.