Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
MSRB1Methionine sulfoxide reductase B1a. (92 aa)    
Predicted Functional Partners:
txnrd2
Thioredoxin reductase 2, tandem duplicate 1; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.
  
  
 0.683
selenot
Selenoprotein T; Belongs to the SelWTH family. Selenoprotein T subfamily.
      
 0.655
selenok
Selenoprotein K.
      
 0.652
selenof
Selenoprotein F.
      
 0.645
selenos
Selenoprotein S.
      
 0.610
LOC107088048
Si:ch1073-358c10.1.
  
 
 0.608
msra
Methionine sulfoxide reductase A.
  
 
 0.608
LOC107082136
Thioredoxin reductase 3.
  
  
 0.592
txn
Thioredoxin; Belongs to the thioredoxin family.
  
 0.574
ENSCVAP00000009203
Uncharacterized protein.
      
 0.563
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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