Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
osbpl6Oxysterol-binding protein; Belongs to the OSBP family. (921 aa)    
Predicted Functional Partners:
asb16
Ankyrin repeat and SOCS box containing 16.
    
 0.676
lrrc20
Leucine rich repeat containing 20.
      
 0.673
LOC107085158
Leucine rich repeat containing 38b.
      
 0.632
LOC107097446
Ankyrin repeat and SOCS box-containing 12a.
    
 0.624
gak
Cyclin G associated kinase.
   
 
 0.615
LOC107092463
Leucine rich repeat containing 14B.
      
 0.607
CSRNP3
Cysteine and serine rich nuclear protein 3.
      
 0.599
LOC107086605
CSRNP_N domain-containing protein.
      
 0.599
LOC107095814
Ankyrin repeat and SOCS box containing 5a.
    
 0.528
vapa
VAMP (vesicle-associated membrane protein)-associated protein A, like.
    
 
 0.527
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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