Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ttc22Tetratricopeptide repeat domain 22. (568 aa)    
Predicted Functional Partners:
KRTCAP3
Keratinocyte associated protein 3.
      
 0.676
fam135b
DUF676 domain-containing protein.
      
 0.607
ENSCVAP00000000989
RIIa domain-containing protein.
      
 0.554
tyw1
tRNA-yW synthesizing protein 1 homolog (S. cerevisiae).
      
 0.503
ttc4
Tetratricopeptide repeat domain 4.
      
 0.499
coq2
4-hydroxybenzoate polyprenyltransferase, mitochondrial; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of coenzyme Q (CoQ) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate.
      
 0.465
ppp1r42
Protein phosphatase 1, regulatory subunit 42.
      
 0.417
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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