Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
ttll7Tubulin tyrosine ligase-like family, member 7. (925 aa)    
Predicted Functional Partners:
svbp
Small vasohibin binding protein.
      
 0.718
ENSCVAP00000019061
Uncharacterized protein.
   
  
 0.649
ccsap
Centriole, cilia and spindle-associated protein b.
      
 0.606
dtnbp1
Dystrobrevin binding protein 1b.
      
 0.546
kif3a
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.543
ENSCVAP00000025381
CDC42 effector protein (Rho GTPase binding) 1b.
      
 0.502
efcab2
EF-hand calcium binding domain 2.
      
 0.485
tfap2d
Transcription factor AP-2 delta (activating enhancer binding protein 2 delta).
      
 0.475
Znf142
Zinc finger protein 142.
      
 0.467
ttll11
Tubulin tyrosine ligase-like family, member 11.
      
 0.464
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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