Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107103912RRM domain-containing protein. (288 aa)    
Predicted Functional Partners:
rbmx
RNA binding motif protein X-linked.
   
0.991
LOC107100983
Heterogeneous nuclear ribonucleoprotein M.
   
 0.991
ENSCVAP00000023138
Heterogeneous nuclear ribonucleoprotein K.
   
 0.987
LOC107088984
Heterogeneous nuclear ribonucleoprotein K, like.
   
 0.987
LOC107091875
Heterogeneous nuclear ribonucleoprotein A1a.
   
 0.981
hnrnpa3
Heterogeneous nuclear ribonucleoprotein A3.
   
 0.981
eif4a3
Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.
   
 0.942
dhx9
DEAH (Asp-Glu-Ala-His) box helicase 9.
   
 
 0.941
ilf3
Interleukin enhancer binding factor 3b.
   
 
 0.914
LOC107102835
RRM domain-containing protein.
  
  
 
0.902
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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