STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
arnt2Aryl-hydrocarbon receptor nuclear translocator 2. (722 aa)    
Predicted Functional Partners:
LOC107087809
Uncharacterized protein.
    
 0.914
npas4
Neuronal PAS domain protein 4a.
    
 0.914
LOC107092283
Aryl hydrocarbon receptor 2.
   
0.888
LOC107097611
Uncharacterized protein.
   
0.843
LOC107092269
Aryl hydrocarbon receptor 1b.
   
0.843
LOC107097609
Aryl hydrocarbon receptor 1b.
   
0.843
hif1a
Hypoxia inducible factor 1 subunit alpha a.
   
0.830
LOC107090627
Endothelial PAS domain protein 1b.
   
0.830
epas1
Uncharacterized protein.
   
0.830
LOC107092506
Hypoxia inducible factor 1 subunit alpha, like.
   
0.830
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.