STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107105132Discs, large (Drosophila) homolog-associated protein 2b. (981 aa)    
Predicted Functional Partners:
ENSCVAP00000009299
FERM_f0 domain-containing protein.
    
 0.785
shank1
SH3 and multiple ankyrin repeat domains 1.
   
 0.778
shank3
SH3 and multiple ankyrin repeat domains 3a.
   
 0.778
LOC107089538
Uncharacterized protein.
   
 0.778
LOC107089074
Uncharacterized protein.
    
 0.729
shank2
SH3 and multiple ankyrin repeat domains 2a.
    
 0.684
ENSCVAP00000003523
L27 domain-containing protein.
    
 0.617
ENSCVAP00000007764
Uncharacterized protein.
    
 0.617
ENSCVAP00000010397
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.617
dlg1
Uncharacterized protein; Belongs to the MAGUK family.
    
 0.617
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.