STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
drap1DR1-associated protein 1 (negative cofactor 2 alpha). (233 aa)    
Predicted Functional Partners:
Dr1
Down-regulator of transcription 1.
   
 
 0.996
btaf1
BTAF1 RNA polymerase II, B-TFIID transcription factor-associated.
    
 
 0.951
ENSCVAP00000008657
Uncharacterized protein.
    
 
 0.927
tbp
TATA box binding protein.
    
 
 0.927
foxh1
Forkhead box H1.
    
 0.859
tbpl1
TBP-like 1.
    
 
 0.754
gtf2b
General transcription factor IIB.
    
 
 0.745
nfyb
Nuclear transcription factor Y, beta a.
    
 
 0.526
mtbp
MDM2 binding protein.
      
 0.483
usp13
Ubiquitin carboxyl-terminal hydrolase.
      
 0.450
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.