Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
ENSCVAP00000001835Amyloid beta (A4) precursor protein-binding, family B, member 3. (427 aa)    
Predicted Functional Partners:
APP
Amyloid beta precursor protein.
    
 0.773
LOC107104503
Amyloid beta (A4) precursor protein b.
    
 0.757
ankrd6
Ankyrin repeat domain 6b.
    
 0.733
aplp2
Amyloid beta (A4) precursor-like protein 2.
    
 0.729
aplp1
Amyloid beta (A4) precursor-like protein 1.
    
 0.725
fam83d
Family with sequence similarity 83 member D.
   
 
 0.685
ENSCVAP00000016821
ANK_REP_REGION domain-containing protein.
    
 0.634
LOC107101428
UF2 component of NDC80 kinetochore complex.
   
 0.633
spcs3
Signal peptidase complex subunit 3.
    
 
 0.612
cops3
COP9 signalosome subunit 3.
    
 0.600
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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