STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP000000018484.1m domain-containing protein. (136 aa)    
Predicted Functional Partners:
ENSCVAP00000001965
Protein kinase domain-containing protein.
    
 0.753
cask
Calcium/calmodulin-dependent serine protein kinase b; Belongs to the MAGUK family.
    
 0.753
ENSCVAP00000021138
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
    
 0.753
ENSCVAP00000001867
Uncharacterized protein.
 
      0.689
lrrtm2
Leucine rich repeat transmembrane neuronal 2.
   
 0.594
ENSCVAP00000032118
Guanylate kinase-like domain-containing protein.
    
 0.523
shank1
SH3 and multiple ankyrin repeat domains 1.
   
 
 0.518
shank3
SH3 and multiple ankyrin repeat domains 3a.
   
 
 0.518
LOC107089538
Uncharacterized protein.
   
 
 0.518
ENSCVAP00000009299
FERM_f0 domain-containing protein.
     
 0.517
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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