STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Slc4a11Solute carrier family 4 member 11. (826 aa)    
Predicted Functional Partners:
LOC107089511
Potassium channel tetramerization domain containing 2.
   
 0.615
kcnq3
Potassium voltage-gated channel, KQT-like subfamily, member 3; Belongs to the potassium channel family.
      
 0.540
LOC107089550
Potassium channel tetramerization domain containing 5a.
      
 0.540
ENSCVAP00000016887
Collagen, type XXI, alpha 1.
      
 0.503
cyyr1
Cysteine/tyrosine-rich 1.
      
 0.407
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.