Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC107093177ST3 beta-galactoside alpha-2,3-sialyltransferase 8; Belongs to the glycosyltransferase 29 family. (381 aa)    
Predicted Functional Partners:
sppl3
Signal peptide peptidase 3.
      
 0.557
mtrr
5-methyltetrahydrofolate-homocysteine methyltransferase reductase.
      
 0.556
hus1
Checkpoint protein; Belongs to the HUS1 family.
      
 0.543
tmtc3
Transmembrane O-mannosyltransferase targeting cadherins 3.
   
  
 0.529
pomt1
Protein-O-mannosyltransferase 1.
      
 0.529
St3gal5
ST3 beta-galactoside alpha-2,3-sialyltransferase 5; Belongs to the glycosyltransferase 29 family.
  
   
0.525
LOC107094926
Prokineticin receptor 1a; Belongs to the G-protein coupled receptor 1 family.
      
 0.502
LOC107090278
Prokineticin receptor 1b; Belongs to the G-protein coupled receptor 1 family.
      
 0.502
LOC107086750
Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1a.
    
 
 0.490
LOC107082129
Core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase, 1b.
    
 
 0.490
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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