Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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[Homology]
Score
neu1Neuraminidase 1. (387 aa)    
Predicted Functional Partners:
glb1
Galactosidase, beta 1; Belongs to the glycosyl hydrolase 35 family.
  
 0.994
glb1l
Galactosidase, beta 1-like; Belongs to the glycosyl hydrolase 35 family.
  
 0.947
hexa
Beta-hexosaminidase.
  
 0.941
hexb
Beta-hexosaminidase.
  
 0.940
b4galt5
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5.
   
 
 0.933
CTSA
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.921
ctsa
Cathepsin A; Belongs to the peptidase S10 family.
   
 0.921
LOC107105074
Carboxypeptidase; Belongs to the peptidase S10 family.
   
 0.921
arsa
Arylsulfatase A.
    
 0.918
gla
Alpha-galactosidase.
     
 0.913
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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