Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
zbtb10Zinc finger and BTB domain containing 10. (597 aa)    
Predicted Functional Partners:
naif1
Nuclear apoptosis inducing factor 1.
      
 0.502
ENSCVAP00000019133
HECT domain-containing protein.
    
 
 0.483
huwe1
HECT, UBA and WWE domain containing E3 ubiquitin protein ligase 1.
    
 
 0.483
srbd1
S1 RNA binding domain 1.
    
 
 0.430
klf12
Kruppel-like factor 12b.
    
 
 0.430
mysm1
Myb-like, SWIRM and MPN domains 1.
   
  0.428
iqce
Uncharacterized protein.
    
 
 0.420
VEZF1
Vascular endothelial zinc finger 1.
      
 0.417
LOC107087496
DNA cross-link repair 1B.
    
 
 0.407
DCLRE1B
DNA cross-link repair 1B.
    
 
 0.407
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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