rngtt protein (Cyprinodon variegatus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

rngtt

Polynucleotide 5'-triphosphatase; Bifunctional mRNA-capping enzyme exhibiting RNA 5'- triphosphatase activity in the N-terminal part and mRNA guanylyltransferase activity in the C-terminal part. Catalyzes the first two steps of cap formation: by removing the gamma-phosphate from the 5'-triphosphate end of nascent mRNA to yield a diphosphate end, and by transferring the gmp moiety of GTP to the 5'-diphosphate terminus. (601 aa)

Predicted Functional Partners:

rnmt

0.995

supt5h

0.990

polr2a

0.941

polr2g

0.940

polr2d

0.937

ENSCVAP00000006489

0.929

nup50

0.929

LOC107099697

0.906

POLR2C

0.906

polr2j

0.902

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCVAP00000006489	LOC107099697	ENSCVAP00000006489	ENSCVAP00000003519	Uncharacterized protein.	RPOLD domain-containing protein.	0.874
ENSCVAP00000006489	POLR2C	ENSCVAP00000006489	ENSCVAP00000015156	Uncharacterized protein.	Polymerase (RNA) II (DNA directed) polypeptide C.	0.874
ENSCVAP00000006489	polr2d	ENSCVAP00000006489	ENSCVAP00000000422	Uncharacterized protein.	Polymerase (RNA) II (DNA directed) polypeptide D.	0.942
ENSCVAP00000006489	polr2g	ENSCVAP00000006489	ENSCVAP00000017932	Uncharacterized protein.	Polymerase (RNA) II (DNA directed) polypeptide G-like.	0.943
ENSCVAP00000006489	polr2j	ENSCVAP00000006489	ENSCVAP00000011913	Uncharacterized protein.	Polymerase (RNA) II (DNA directed) polypeptide J.	0.942
ENSCVAP00000006489	rngtt	ENSCVAP00000006489	ENSCVAP00000001899	Uncharacterized protein.	Polynucleotide 5'-triphosphatase; Bifunctional mRNA-capping enzyme exhibiting RNA 5'- triphosphatase activity in the N-terminal part and mRNA guanylyltransferase activity in the C-terminal part. Catalyzes the first two steps of cap formation: by removing the gamma-phosphate from the 5'-triphosphate end of nascent mRNA to yield a diphosphate end, and by transferring the gmp moiety of GTP to the 5'-diphosphate terminus.	0.929
ENSCVAP00000006489	rnmt	ENSCVAP00000006489	ENSCVAP00000009532	Uncharacterized protein.	mRNA cap guanine-N7 methyltransferase.	0.835
ENSCVAP00000006489	supt5h	ENSCVAP00000006489	ENSCVAP00000023845	Uncharacterized protein.	Transcription elongation factor SPT5.	0.945
LOC107099697	ENSCVAP00000006489	ENSCVAP00000003519	ENSCVAP00000006489	RPOLD domain-containing protein.	Uncharacterized protein.	0.874
LOC107099697	POLR2C	ENSCVAP00000003519	ENSCVAP00000015156	RPOLD domain-containing protein.	Polymerase (RNA) II (DNA directed) polypeptide C.	0.544
LOC107099697	polr2a	ENSCVAP00000003519	ENSCVAP00000003901	RPOLD domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.992
LOC107099697	polr2d	ENSCVAP00000003519	ENSCVAP00000000422	RPOLD domain-containing protein.	Polymerase (RNA) II (DNA directed) polypeptide D.	0.989
LOC107099697	polr2g	ENSCVAP00000003519	ENSCVAP00000017932	RPOLD domain-containing protein.	Polymerase (RNA) II (DNA directed) polypeptide G-like.	0.994
LOC107099697	polr2j	ENSCVAP00000003519	ENSCVAP00000011913	RPOLD domain-containing protein.	Polymerase (RNA) II (DNA directed) polypeptide J.	0.986
LOC107099697	rngtt	ENSCVAP00000003519	ENSCVAP00000001899	RPOLD domain-containing protein.	Polynucleotide 5'-triphosphatase; Bifunctional mRNA-capping enzyme exhibiting RNA 5'- triphosphatase activity in the N-terminal part and mRNA guanylyltransferase activity in the C-terminal part. Catalyzes the first two steps of cap formation: by removing the gamma-phosphate from the 5'-triphosphate end of nascent mRNA to yield a diphosphate end, and by transferring the gmp moiety of GTP to the 5'-diphosphate terminus.	0.906
LOC107099697	rnmt	ENSCVAP00000003519	ENSCVAP00000009532	RPOLD domain-containing protein.	mRNA cap guanine-N7 methyltransferase.	0.667
LOC107099697	supt5h	ENSCVAP00000003519	ENSCVAP00000023845	RPOLD domain-containing protein.	Transcription elongation factor SPT5.	0.975
POLR2C	ENSCVAP00000006489	ENSCVAP00000015156	ENSCVAP00000006489	Polymerase (RNA) II (DNA directed) polypeptide C.	Uncharacterized protein.	0.874
POLR2C	LOC107099697	ENSCVAP00000015156	ENSCVAP00000003519	Polymerase (RNA) II (DNA directed) polypeptide C.	RPOLD domain-containing protein.	0.544
POLR2C	polr2a	ENSCVAP00000015156	ENSCVAP00000003901	Polymerase (RNA) II (DNA directed) polypeptide C.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.992

page 1 of 5

Server load: medium (54%) [HD]

Permalink

Network

Co-occurrence

Experiments

Co-expression

Databases

Neighborhood

Textmining

Fusion

© STRING Consortium 2026

Credits

Access

Info

About