Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
LOC107082769Clat_adaptor_s domain-containing protein. (133 aa)    
Predicted Functional Partners:
LOC107087706
AP-1 complex subunit gamma.
   
 0.915
ap4b1
Adaptor related protein complex 4 subunit beta 1.
   
 0.911
ap1g1
AP-1 complex subunit gamma.
   
 0.899
ap1b1
AP complex subunit beta.
   
 0.871
ENSCVAP00000003372
Adaptin_N domain-containing protein.
   
 0.821
ENSCVAP00000022109
AP4E_app_platf domain-containing protein.
   
 0.821
LOC107090293
AP complex subunit beta.
   
 0.818
ENSCVAP00000023658
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
   
 0.817
gak
Cyclin G associated kinase.
   
 0.790
LOC107087306
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
   
 0.763
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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