LOC107080713 protein (Cyprinodon variegatus)

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Known Interactions

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Predicted Interactions

gene neighborhood

gene fusions

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textmining

co-expression

protein homology

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[Homology]

Score

LOC107080713

Uncharacterized protein. (780 aa)

Predicted Functional Partners:

LOC107092850

0.900

prpf6

0.803

eftud2

0.775

cdc5l

0.699

atp5po

0.694

atp5f1c

0.686

atp5f1b

0.683

gtpbp4

0.671

pes1

0.671

sf3b3

0.667

Your Current Organism:

Cyprinodon variegatus

NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC107080713	LOC107092850	ENSCVAP00000001922	ENSCVAP00000020794	Uncharacterized protein.	Uncharacterized protein.	0.900
LOC107080713	atp5f1b	ENSCVAP00000001922	ENSCVAP00000007274	Uncharacterized protein.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.683
LOC107080713	atp5f1c	ENSCVAP00000001922	ENSCVAP00000017181	Uncharacterized protein.	ATP synthase subunit gamma.	0.686
LOC107080713	atp5po	ENSCVAP00000001922	ENSCVAP00000015258	Uncharacterized protein.	ATP synthase peripheral stalk subunit OSCP.	0.694
LOC107080713	cdc5l	ENSCVAP00000001922	ENSCVAP00000012384	Uncharacterized protein.	CDC5 cell division cycle 5-like (S. pombe).	0.699
LOC107080713	eftud2	ENSCVAP00000001922	ENSCVAP00000010358	Uncharacterized protein.	Elongation factor Tu GTP binding domain containing 2.	0.775
LOC107080713	gtpbp4	ENSCVAP00000001922	ENSCVAP00000024691	Uncharacterized protein.	Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.	0.671
LOC107080713	pes1	ENSCVAP00000001922	ENSCVAP00000026194	Uncharacterized protein.	Pescadillo homolog; Component of the PeBoW complex, which is required for maturation of 28S and 5.8S ribosomal RNAs and formation of the 60S ribosome.	0.671
LOC107080713	prpf6	ENSCVAP00000001922	ENSCVAP00000025594	Uncharacterized protein.	PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae).	0.803
LOC107080713	sf3b3	ENSCVAP00000001922	ENSCVAP00000025538	Uncharacterized protein.	Splicing factor 3b, subunit 3.	0.667
LOC107092850	LOC107080713	ENSCVAP00000020794	ENSCVAP00000001922	Uncharacterized protein.	Uncharacterized protein.	0.900
atp5f1b	LOC107080713	ENSCVAP00000007274	ENSCVAP00000001922	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Uncharacterized protein.	0.683
atp5f1b	atp5f1c	ENSCVAP00000007274	ENSCVAP00000017181	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase subunit gamma.	0.999
atp5f1b	atp5po	ENSCVAP00000007274	ENSCVAP00000015258	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	ATP synthase peripheral stalk subunit OSCP.	0.999
atp5f1b	eftud2	ENSCVAP00000007274	ENSCVAP00000010358	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	Elongation factor Tu GTP binding domain containing 2.	0.467
atp5f1c	LOC107080713	ENSCVAP00000017181	ENSCVAP00000001922	ATP synthase subunit gamma.	Uncharacterized protein.	0.686
atp5f1c	atp5f1b	ENSCVAP00000017181	ENSCVAP00000007274	ATP synthase subunit gamma.	ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.999
atp5f1c	atp5po	ENSCVAP00000017181	ENSCVAP00000015258	ATP synthase subunit gamma.	ATP synthase peripheral stalk subunit OSCP.	0.999
atp5f1c	eftud2	ENSCVAP00000017181	ENSCVAP00000010358	ATP synthase subunit gamma.	Elongation factor Tu GTP binding domain containing 2.	0.797
atp5po	LOC107080713	ENSCVAP00000015258	ENSCVAP00000001922	ATP synthase peripheral stalk subunit OSCP.	Uncharacterized protein.	0.694