STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Prps2Pribosyltran_N domain-containing protein. (169 aa)    
Predicted Functional Partners:
LOC107081479
Uncharacterized protein.
 
  
  0.994
Ppat
Amidophosphoribosyltransferase.
  
 0.944
rbks
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
  
 0.943
rpia
Ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase).
  
 
 0.941
TKT
Transketolase.
   
 
 0.939
LOC107087052
Transketolase b.
   
 
 0.939
LOC107094766
Transketolase a.
   
 
 0.939
pgm2
Phosphoglucomutase 2.
  
 0.932
umps
Uridine monophosphate synthetase.
  
 
 0.920
pgm1
Phosphoglucomutase 1; Belongs to the phosphohexose mutase family.
   
 
 0.912
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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