Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Prps2Pribosyltran_N domain-containing protein. (169 aa)    
Predicted Functional Partners:
LOC107081479
Uncharacterized protein.
 
  
  0.994
Ppat
Amidophosphoribosyltransferase.
  
 0.949
rpia
Ribose 5-phosphate isomerase A (ribose 5-phosphate epimerase).
  
 
 0.942
rbks
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
   
 0.941
TKT
Transketolase.
   
 
 0.937
LOC107087052
Transketolase b.
   
 
 0.937
LOC107094766
Transketolase a.
   
 
 0.937
pgm2
Phosphoglucomutase 2.
  
 0.932
PRPSAP1
Phosphoribosyl pyrophosphate synthetase associated protein 1.
  
 
0.924
prpsap2
Phosphoribosyl pyrophosphate synthetase-associated protein 2.
  
 
0.923
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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