Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ptpn5Protein tyrosine phosphatase non-receptor type 5. (570 aa)    
Predicted Functional Partners:
LOC107101186
Mitogen-activated protein kinase.
    
  0.906
mapk1
Mitogen-activated protein kinase.
    
  0.906
Ptprr
Tyrosine-protein phosphatase domain-containing protein.
    
 
0.904
LOC107100975
Uncharacterized protein.
    
 
0.904
dusp3
Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.
    
  0.902
LOC107104997
Dual specificity protein phosphatase; Dual specificity phosphatase able to dephosphorylate phosphotyrosine, phosphoserine and phosphothreonine residues, with a preference for phosphotyrosine as a substrate. Belongs to the protein-tyrosine phosphatase family. Non- receptor class dual specificity subfamily.
    
  0.902
LOC107086723
Mitogen-activated protein kinase.
    
  0.663
LOC107101432
Mitogen-activated protein kinase.
    
  0.663
LOC107087504
Mitogen-activated protein kinase.
    
  0.663
LOC107101278
Mitogen-activated protein kinase 12b.
    
  0.663
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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