Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
slc25a19Solute carrier family 25 member 19; Belongs to the mitochondrial carrier (TC 2.A.29) family. (357 aa)    
Predicted Functional Partners:
rpl4
Ribosomal protein L4.
   
 
 0.704
smndc1
Survival motor neuron domain containing 1.
   
  
 0.687
rpl14
Ribosomal protein L14.
   
 
 0.686
ENSCVAP00000025919
Uncharacterized protein.
   
 
 0.686
rps18
Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
   
 
 0.677
rpl6
Ribosomal protein L6.
   
 
 0.673
rpl8
Ribosomal protein L8.
   
 
 0.669
fau
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.662
RPL27A
Ribosomal protein L27a; Belongs to the universal ribosomal protein uL15 family.
   
   0.655
rpl32
Ribosomal protein L32.
   
 
 0.642
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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