Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
LOC107103895Phosphoenolpyruvate carboxykinase 2 (mitochondrial). (635 aa)    
Predicted Functional Partners:
pc
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
   
 
 0.970
Mdh2
Ldh_1_N domain-containing protein.
    
 0.964
eno1
Enolase 1a, (alpha).
     
 0.962
LOC107100101
Enolase 1b, (alpha).
     
 0.962
LOC107102308
Enolase 3, (beta, muscle).
     
 0.962
eno2
Uncharacterized protein.
     
 0.962
LOC107086089
Enolase 2.
     
 0.962
LOC107088625
Malate dehydrogenase.
  
 
 0.961
LOC107094037
Malate dehydrogenase.
  
 
 0.961
cs
Citrate synthase; Belongs to the citrate synthase family.
   
 
 0.945
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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