STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107103895Phosphoenolpyruvate carboxykinase 2 (mitochondrial). (635 aa)    
Predicted Functional Partners:
pc
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
   
 
 0.966
LOC107088625
Malate dehydrogenase.
  
 
 0.965
Mdh2
Ldh_1_N domain-containing protein.
  
 
 0.965
LOC107094037
Malate dehydrogenase.
  
 
 0.965
cs
Citrate synthase; Belongs to the citrate synthase family.
   
 
 0.965
eno1
Enolase 1a, (alpha).
     
 0.964
LOC107100101
Enolase 1b, (alpha).
     
 0.964
LOC107102308
Enolase 3, (beta, muscle).
     
 0.964
eno2
Uncharacterized protein.
     
 0.964
LOC107086089
Enolase 2.
     
 0.964
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.