Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LOC107096201Protein tyrosine kinase 2; Belongs to the protein kinase superfamily. Tyr protein kinase family. (1105 aa)    
Predicted Functional Partners:
grb2
Growth factor receptor-bound protein 2b.
   
 0.989
bcar1
BCAR1 scaffold protein, Cas family member.
   
 0.980
pxn
Paxillin b.
    
 0.977
ENSCVAP00000003761
Integrin beta; Belongs to the integrin beta chain family.
   
 0.969
LOC107084752
Integrin beta; Belongs to the integrin beta chain family.
   
 0.967
itgb3
Integrin beta; Belongs to the integrin beta chain family.
   
 0.967
SRC
Tyrosine-protein kinase.
   
0.964
itgb4
Integrin beta.
   
 0.962
itgb1
Integrin beta; Belongs to the integrin beta chain family.
   
 0.960
LOC107094308
Integrin beta; Belongs to the integrin beta chain family.
   
 0.960
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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