Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
mxd4MAX dimerization protein 4. (212 aa)    
Predicted Functional Partners:
max
Myc associated factor X.
    
 
 0.927
MAX
MYC associated factor X.
    
 
 0.927
mlx
MAX dimerization protein MLX.
    
 
 0.891
mlxip
MLX interacting protein.
      
 0.606
LOC107098367
MAX network transcriptional repressor b.
      
 0.606
LOC107101521
BHLH domain-containing protein.
      
 0.606
mnt
MAX network transcriptional repressor a.
      
 0.606
LOC107081640
MYCN proto-oncogene, bHLH transcription factor.
    
 0.582
ngrn
Neugrin, neurite outgrowth associated.
      
 0.557
tfdp1
Transcription factor.
    
 0.556
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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