STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kcnj11Potassium inwardly-rectifying channel, subfamily J, member 11. (396 aa)    
Predicted Functional Partners:
abcc8
ATP-binding cassette, sub-family C (CFTR/MRP), member 8.
 
 
 0.956
ENSCVAP00000003264
ATP-binding cassette, sub-family C (CFTR/MRP), member 9.
 
 
 0.929
rps13
Ribosomal protein S13; Belongs to the universal ribosomal protein uS15 family.
      
 0.671
LOC107091899
Rap guanine nucleotide exchange factor (GEF) 3.
     
 0.621
rapgef4
Zgc:171558.
     
 0.559
LOC107085744
Rap guanine nucleotide exchange factor (GEF) 4.
     
 0.559
prkacb
Uncharacterized protein; Belongs to the protein kinase superfamily.
   
 
 0.447
LOC107090031
Protein kinase, cAMP-dependent, catalytic, beta b; Belongs to the protein kinase superfamily.
   
 
 0.447
LOC107093417
Protein kinase, cAMP-dependent, catalytic, alpha, genome duplicate a; Belongs to the protein kinase superfamily.
   
 
 0.447
prkaca
Uncharacterized protein; Belongs to the protein kinase superfamily.
   
 
 0.447
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.