STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
brd1Bromodomain containing 1a. (1204 aa)    
Predicted Functional Partners:
meaf6
MYST/Esa1-associated factor 6.
    
 0.866
ing4
Inhibitor of growth protein.
    
 0.670
LOC107099458
Inhibitor of growth family, member 5a.
    
 0.670
kat6a
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.620
ENSCVAP00000011901
Uncharacterized protein.
   
 0.614
kat7
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.614
kat6b
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.614
LOC107099646
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.614
kat5
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.614
kat8
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
   
 0.614
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.