Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCVAP00000001993Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family. (263 aa)    
Predicted Functional Partners:
LOC107091770
Si:dkey-16l2.16.
    
 0.852
rab35
RAB35, member RAS oncogene family b.
    
 0.852
rab12
RAB12, member RAS oncogene family.
    
 0.827
rab18
RAB18A, member RAS oncogene family.
   
 0.812
rab7a
Uncharacterized protein.
   
 0.793
LOC107093905
RAB7a, member RAS oncogene family.
   
 0.793
rab24
RAB24, member RAS oncogene family.
   
 0.784
ENSCVAP00000029489
Uncharacterized protein.
   
 0.776
rab14
RAB14, member RAS oncogene family.
   
 0.776
rab41
RAB41, member RAS oncogene family.
   
 0.771
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
Server load: low (22%) [HD]