STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC107098453Rho GTPase activating protein 22. (737 aa)    
Predicted Functional Partners:
mst1r
Macrophage stimulating 1 receptor b.
   
 0.636
met
MET proto-oncogene, receptor tyrosine kinase.
   
 0.636
LOC107097508
Macrophage stimulating 1 receptor a.
   
 0.636
meak7
MTOR associated protein, eak-7 homolog.
      
 0.554
rab25
RAB25, member RAS oncogene family b.
    
 0.519
LOC107083238
Uncharacterized protein.
    
 0.519
LOC107085465
RAS protein activator like 3.
    
 0.424
Rasal2
RAS protein activator like 2.
    
 0.424
dab2ip
DAB2 interacting protein b.
    
 0.424
LOC107104260
Uncharacterized protein.
    
 0.424
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.