STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pank4Pantothenate kinase. (774 aa)    
Predicted Functional Partners:
LOC107087463
Coiled-coil domain containing 30.
     
 0.948
ppcs
Phosphopantothenoylcysteine synthetase.
     
 0.948
LOC107090319
Cytochrome c oxidase assembly factor COX19.
     
 0.762
ppcdc
Phosphopantothenoylcysteine decarboxylase.
     
 0.762
coasy
CoA synthase.
    
 
 0.679
rrp8
Ribosomal RNA-processing protein 8; Probable methyltransferase required to silence rDNA. Belongs to the methyltransferase superfamily. RRP8 family.
      
 0.672
dcakd
Dephospho-CoA kinase domain containing.
    
 
 0.672
tpk1
Thiamine pyrophosphokinase; Belongs to the thiamine pyrophosphokinase family.
      
 0.671
mlx
MAX dimerization protein MLX.
      
 0.671
armt1
Acidic residue methyltransferase 1.
      
 0.667
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.