STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc30a8Solute carrier family 30 member 8. (403 aa)    
Predicted Functional Partners:
LOC107104039
Carrier domain-containing protein.
  
 
 0.595
fasn
Coiled-coil domain containing 57.
  
 
 0.595
LOC107104718
Si:dkey-61p9.11.
  
 
 0.595
LOC107104719
Carrier domain-containing protein.
  
 
 0.595
slc30a9
Solute carrier family 30 member 9.
      
 0.483
slc30a6
Solute carrier family 30 member 6.
    
 
0.438
aasdh
Aminoadipate-semialdehyde dehydrogenase.
  
  
 0.425
aasdhppt
Aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase.
  
  
 0.405
slc39a13
Solute carrier family 39 member 13.
      
 0.402
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.