STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ogaO-GlcNAcase. (933 aa)    
Predicted Functional Partners:
dda1
DET1 and DDB1 associated 1.
      
 0.662
ogt
O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1.
   
 
 0.649
tk1
Thymidine kinase.
   
  
 0.560
pprc1
PPARG related coactivator 1.
      
 0.536
cant1
Calcium activated nucleotidase 1a.
      
 0.509
sec31a
SEC31 homolog A, COPII coat complex component.
      
 0.491
uap1
UDP-N-acetylglucosamine pyrophosphorylase 1.
      
 0.489
rb1cc1
RB1-inducible coiled-coil 1.
   
  
 0.431
mrpl41
Mitochondrial ribosomal protein L41.
    
  0.427
mrpl11
Mitochondrial ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
   
 
  0.424
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.