STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
muc15Uncharacterized protein. (432 aa)    
Predicted Functional Partners:
LOC107097057
Si:ch73-12o23.1; Belongs to the glycosyl hydrolase 31 family.
      
 0.662
ENSCVAP00000006639
Si:ch211-191j22.3.
      
 0.644
basp1
Brain abundant, membrane attached signal protein 1.
      
 0.644
GALNT3
Polypeptide N-acetylgalactosaminyltransferase.
     
 0.587
heg1
Uncharacterized protein.
     
 0.510
blzf1
Basic leucine zipper nuclear factor 1.
      
 0.487
LOC107087911
RAB38b, member of RAS oncogene family.
      
 0.485
Gcnt3
Glucosaminyl (N-acetyl) transferase 3, mucin type.
   
 
 0.475
vwf
Von Willebrand factor.
   
 
 0.439
LOC107090356
Si:dkeyp-87d8.8.
   
 
 0.437
Your Current Organism:
Cyprinodon variegatus
NCBI taxonomy Id: 28743
Other names: C. variegatus, sheepshead minnow
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.